Index |
Plasmid Vectors I
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Vectors II |
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Enzymes |
Vectors I |
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Plasmid vectors share three key features: | |||||||||||||||||||||||||||
Origin of replication.
Required for automous replication of the plasmid using the host's replication machinery. It is worth noting that bacterial origins of replication are tightly regulated.
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Selectable Markers
Selectable markers are essential for the identification of bacteria containing recombinant plasmids. Selection can be divided into two types:
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Positive Selection
Positive selection is used to identify bacteria that contain a plasmid. The most common markers used for positive selection are the antibiotic resistance genes carried by the original R factors. |
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Antibiotics affecting cell wall synthesis Ampicillin is a beta-lactam based antibiotic that acts by inhibiting the synthesis of the bacterial peptidoglycan cell wall. Sensitive bacteria are not actively 'killed', but on cell division are unable to synthesize the cell wall and suffer from osmotic lysis. The enzyme beta-lactamase is secreted into the periplasmic space where it breaks down the antibiotic, allowing cell wall synthesis to proceed. |
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Antibiotics affecting translation: The antibiotics tetracycline, kanamycin and chloramphenicol all act by inhibiting translation. The covalent modification (phosphorylation, acetylation) of these antibiotics blocks their interaction with the translation apparatus.
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Positive selection is particularly important when introducing plasmids into bacteria by transformation. At best, only about 1 in 10,000 bacteria picks up a plasmid that carries the antibiotic resistance. A strong positive selection system is essential to eliminate the 9,999 bacteria that didn't pick up a plasmid from the one that did. By plating the transformation products directly on antibiotic plates, all untransformed bacteria die and only those containing the plasmid (and antibiotic resistance marker) grow to form colonies.
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Negative Selection
The ligation of foreign DNA fragments into plasmid vectors is a relatively inefficient process - ligation can either produce recircularized plasmid with no insert, or plasmids containing a foreign DNA insert. These products are then transformed into an antibiotic sensitive bacterial host, an positive selection applied to identify bacteria that contain a plasmid. A second selection system is necessary to distinguish between plasmids that merely recircularized from those that carry a foreign DNA insert. Two types of selectable markers are used for negative selection |
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Insertional inactivation of antibiotic resistance.
In order to use antibiotic resistance as a negative as well as a positive selection system, the plasmid vector must carry two different antibiotic resistance genes. An example of such a vector is pBR322.
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pBR322 carries both an ampicllin and a tetracycline resistance gene. Insertion of foreign DNA into Conversely, insertion of foreign DNA into the EcoRI, Hind III or Sal I sites located in the Tetr gene results in an
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In order to reveal these phenotypes, transformants are first plated on positive selective media (Tet or Amp respectively). Positively selected colonies are then restreaked on positive selective media and on the negative selection media. |
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Ampr - Tets |
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Ampr - Tets |
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Amps - Tetr |
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Insertional Inactivation of Enzymatic Activity While the insertional inactivation of antibiotic resistance works, it requires a lot of manipulation - picking the positively selected bacteria and replating on negative selection media etc. In addition to the tedium of picking colonies, vectors like pBR322 also suffer from a paucity of convenient restriction sites at which to insert the foreign DNA fragemnts. These limitations promted the development of a set of host-vector systems in which it is possible to positively select for bacteria carrying a plasmid and simultaneously select for insertional inactivation of enzymatic activity. This system is based on our old friend, the
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